The detailed information of tRNA gene sequence


Sequence ID>WENV170688494
Genome IDLFRM01248241
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1331
End posion on genome 1256
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctaataatat
tRNA gene sequence 
CGGGGTGTAGCGCAGGTGGGAGCGCGCGTGCTTTGGGAGCATGAGGTCGCAGGTTCAATC
CCTGTCACCCCGACCA
Downstream region at tRNA end position 
tattaccggt
Secondary structure (Cloverleaf model)
>WENV170688494	Pro	TGG
                   t      ACCA tattaccggt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T G T C C     A
      G G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    G + T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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