The detailed information of tRNA gene sequence


Sequence ID>WENV170688552
Genome IDLFRM01250988
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 18562
End posion on genome 18487
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttatttat
tRNA gene sequence 
CGCGGGATGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGAAGGTTCAAAT
CCTTCTCCCGCAACCA
Downstream region at tRNA end position 
agctaatgag
Secondary structure (Cloverleaf model)
>WENV170688552	Met	CAT
                   t      ACCA agctaatgag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G A A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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