The detailed information of tRNA gene sequence


Sequence ID>WENV170688556
Genome IDLFRM01250988
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3541
End posion on genome 3465
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttgtatatt
tRNA gene sequence 
GGAGCTGTGGTGTAGTGGTCTAACATGCCTGCCTGTCACGCAGGAGATCGCGAGTTCGAC
TCTCGTCAGCTCCGCCA
Downstream region at tRNA end position 
ttcatttttt
Secondary structure (Cloverleaf model)
>WENV170688556	Asp	GTC
                   t      GCCA ttcatttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T G C T C     A
      T G A        G      + | | | |     G
    G       T G T G       G C G A G     C
    G       | | | +                 T T
    T       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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