The detailed information of tRNA gene sequence


Sequence ID>WENV170688557
Genome IDLFRM01250988
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3420
End posion on genome 3345
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aatttaatta
tRNA gene sequence 
GCCTTGGTAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCGGTGGTTCGATT
CCGCCCCAAGGCACCA
Downstream region at tRNA end position 
tttgacttca
Secondary structure (Cloverleaf model)
>WENV170688557	Phe	GAA
                   a      ACCA tttgacttca
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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