The detailed information of tRNA gene sequence


Sequence ID>WENV170688570
Genome IDLFRM01251252
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 116230
End posion on genome 116156
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
tttatggttt
tRNA gene sequence 
GCGGAAGTGGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGAATC
CCGTCTTCCGCTCCA
Downstream region at tRNA end position 
ttttttcact
Secondary structure (Cloverleaf model)
>WENV170688570	Gly	GCC
                   t      TCCA ttttttcact
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G C C C     A
        G A        G      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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