The detailed information of tRNA gene sequence


Sequence ID>WENV170688576
Genome IDLFRM01251252
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 109611
End posion on genome 109535
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taagtttcgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
attttggccc
Secondary structure (Cloverleaf model)
>WENV170688576	Met	CAT
                   t      ACCA attttggccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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