The detailed information of tRNA gene sequence


Sequence ID>WENV170688630
Genome IDLFRM01254841
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9417
End posion on genome 9343
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tataatatat
tRNA gene sequence 
TCCGCGATAGCTCAACGGTGGAGCACTCGGCTGTTAACCGATAGGTTGGAGGTTCGAATC
CTCTTCGCGGAGCCA
Downstream region at tRNA end position 
atttaaatat
Secondary structure (Cloverleaf model)
>WENV170688630	Asn	GTT
                   t      GCCA atttaaatat
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     T C T C C     A
        A A        A      + | | | |     G
      C     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     AGGTT
                    C   T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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