The detailed information of tRNA gene sequence


Sequence ID>WENV170688693
Genome IDLFRM01258226
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 16212
End posion on genome 16284
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccacaccctt
tRNA gene sequence 
GGGCTCGTAGATCAGGGGTAGATCGTTGCGTTCGCAACGCAAAGGCCGCGGGTTCAAATC
CCGCCGAGTCCACtt
Downstream region at tRNA end position 
ctctttctgc
Secondary structure (Cloverleaf model)
>WENV170688693	Ala	CGC
                   t      ACtt ctctttctgc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    T - A
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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