The detailed information of tRNA gene sequence


Sequence ID>WENV170688694
Genome IDLFRM01258226
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7160
End posion on genome 7088
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tgagcacctt
tRNA gene sequence 
GCCAGGGTGGGGTAGTTGGTTATCCTAAGGGACTGTGGATCCCTCGACCCGGGTTCGAAT
CTCGGCCCTGGCCtac
Downstream region at tRNA end position 
tttttagctg
Secondary structure (Cloverleaf model)
>WENV170688694	His	GTG
                   t      Ctac tttttagctg
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     G G C T C     A
      T G A        G      | | | + |     G
    T       T G G G       C C G G G     C
    G         | | +                 T T
    G       T C C T
      T T A        A     CGAC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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