The detailed information of tRNA gene sequence


Sequence ID>WENV170688732
Genome IDLFRM01259833
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 237
End posion on genome 162
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggctttaccc
tRNA gene sequence 
GGGCGAATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCAAGT
CCTGTTTCGCCCACCA
Downstream region at tRNA end position 
cgcggaaccg
Secondary structure (Cloverleaf model)
>WENV170688732	Val	TAC
                   c      ACCA cgcggaaccg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          T G
                    T     T G T C C     A
      C G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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