The detailed information of tRNA gene sequence


Sequence ID>WENV170688753
Genome IDLFRM01260413
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 122
End posion on genome 48
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccatttcaat
tRNA gene sequence 
GGCGCCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATTCCCCGGTTCAAATC
CGGGTGGCGCCTCCA
Downstream region at tRNA end position 
atgtcacagg
Secondary structure (Cloverleaf model)
>WENV170688753	Cys	GCA
                   t      TCCA atgtcacagg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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