The detailed information of tRNA gene sequence


Sequence ID>WENV170688754
Genome IDLFRM01260538
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4338
End posion on genome 4265
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
cactgcacgc
tRNA gene sequence 
GCGGGTGTAGTTCAGTGGTAGAACTTCAGCTTCCCAAGCTGACCGTGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
aacttcatat
Secondary structure (Cloverleaf model)
>WENV170688754	Gly	CCC
                   c      TCCA aacttcatat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        G A        A      + | | | |     G
      T     C T T G       G A G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        T     CCGT
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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