The detailed information of tRNA gene sequence


Sequence ID>WENV170688798
Genome IDLFRM01262127
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 955
End posion on genome 879
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gagttgtcaa
tRNA gene sequence 
GGGCCATTAGCTCAGCTGGCTAGAGCACCTGACTCTTAATCAGGGTGTCCGGGGTTCGAG
TCCCTGATGGCCCACCA
Downstream region at tRNA end position 
aggaaaacgc
Secondary structure (Cloverleaf model)
>WENV170688798	Lys	CTT
                   a      ACCA aggaaaacgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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