The detailed information of tRNA gene sequence


Sequence ID>WENV170688803
Genome IDLFRM01262421
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5480
End posion on genome 5396
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
tcttccccgg
tRNA gene sequence 
GCGAGGGTTGCCGAGCCAGGTCAAAGGCGCAAGGTTGAGGGCCTTGTCACGCAGGTGTTC
GAGCGTTCAAATCGCTCCCCTCGCAttt
Downstream region at tRNA end position 
gttttctcgg
Secondary structure (Cloverleaf model)
>WENV170688803	Leu	GAG
                   g      Attt gttttctcgg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C G C     A
    C C G A        T      | | | | |     A
  A         G C C G       G A G C G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCACGCAGGTGTTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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