The detailed information of tRNA gene sequence


Sequence ID>WENV170688825
Genome IDLFRM01263725
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1846
End posion on genome 1771
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
actataggta
tRNA gene sequence 
GATTCGCTAGCTCAGTAGGTAGAGCACATCCCTTTTAAGGATGGGGTCCTGGGTTCGAAC
CCCAGGCGGATCACTA
Downstream region at tRNA end position 
aaaacgtcaa
Secondary structure (Cloverleaf model)
>WENV170688825	Lys	TTT
                   a      ACTA aaaacgtcaa
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C
                     C - G          C A
                    T     G A C C C     A
      T G A        A      | | | | |     G
    A       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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