The detailed information of tRNA gene sequence


Sequence ID>WENV170688859
Genome IDLFRM01265502
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 501
End posion on genome 426
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgcttttaat
tRNA gene sequence 
GGGGCCTTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAAT
CCGTTAGGCTCCACCA
Downstream region at tRNA end position 
ataccttgac
Secondary structure (Cloverleaf model)
>WENV170688859	Ala	TGC
                   t      ACCA ataccttgac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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