The detailed information of tRNA gene sequence


Sequence ID>WENV170688881
Genome IDLFRM01266053
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7431
End posion on genome 7505
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgaaaaatct
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACGCGGGTTCGAGTC
CCGCAGGGGTCACCA
Downstream region at tRNA end position 
taagggcgat
Secondary structure (Cloverleaf model)
>WENV170688881	Glu	TTC
                   t      ACCA taagggcgat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       A C T G       G C G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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