The detailed information of tRNA gene sequence


Sequence ID>WENV170688895
Genome IDLFRM01266878
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13168
End posion on genome 13241
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctcgaagatc
tRNA gene sequence 
GGGCTTATAGCTCAGCTGGAAGAGCGCCGCCTTTGCGAGGCGGAGGCCGGGGGTTCAAAT
CCCCCTAAGTCCACtt
Downstream region at tRNA end position 
caatgcaccc
Secondary structure (Cloverleaf model)
>WENV170688895	Ala	TGC
                   c      ACtt caatgcaccc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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