The detailed information of tRNA gene sequence


Sequence ID>WENV170688914
Genome IDLFRM01268296
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 121
End posion on genome 35
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
attctcatat
tRNA gene sequence 
GCAGGGGTGGTCGAGCGGTCAAAGGCGCTAGGTTGAGGGCCTAGTGGGGGAGTCCCTTCG
CGGGTTCGAATCCCGTCCCCTGCACTA
Downstream region at tRNA end position 
ttcaaatact
Secondary structure (Cloverleaf model)
>WENV170688914	Leu	GAG
                   t      ACTA ttcaaatact
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       G C T G       G C G G G     C
    G         | + |                 T T
    T       A G G C
      C A A        G     TGGGGGAGTCCCTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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