The detailed information of tRNA gene sequence


Sequence ID>WENV170688918
Genome IDLFRM01268413
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13450
End posion on genome 13525
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
attggtgaat
tRNA gene sequence 
GTGCCATTAGCTCAGCTGGTAGAGCACCTGACTCTTAATCAGGGAGTCCAGGGTTCGAGT
CCCTGATGGCGCACCA
Downstream region at tRNA end position 
aaaaaacaaa
Secondary structure (Cloverleaf model)
>WENV170688918	Lys	CTT
                   t      ACCA aaaaaacaaa
                     G - C
                     T + G
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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