The detailed information of tRNA gene sequence


Sequence ID>WENV170688921
Genome IDLFRM01268413
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 20976
End posion on genome 20901
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tcgccaatgt
tRNA gene sequence 
GCCCAGATAGCTCAGTCGGTAGAGCAGTGGACTGAAAATCCTCGTGTCGGTGGTTCGATT
CCGCCTCTGGGCACCA
Downstream region at tRNA end position 
actttttttg
Secondary structure (Cloverleaf model)
>WENV170688921	Phe	GAA
                   t      ACCA actttttttg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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