The detailed information of tRNA gene sequence


Sequence ID>WENV170688959
Genome IDLFRM01270087
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 10199
End posion on genome 10123
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tttttcaaat
tRNA gene sequence 
GCACTCGTAGCTCAGCTGGATAGAGTATTGCCCTCCGAAGGCAAGGGTCGTGGGTTCGAA
TCCCGCCGAGTGCGCCA
Downstream region at tRNA end position 
tttcccttta
Secondary structure (Cloverleaf model)
>WENV170688959	Arg	CCG
                   t      GCCA tttcccttta
                     G - C
                     C - G
                     A - T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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