The detailed information of tRNA gene sequence


Sequence ID>WENV170688964
Genome IDLFRM01270250
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 430
End posion on genome 355
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gctttacccc
tRNA gene sequence 
GGGCGAATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCAAGT
CCTGTTTCGCCCACCA
Downstream region at tRNA end position 
cgcggaaccg
Secondary structure (Cloverleaf model)
>WENV170688964	Val	TAC
                   c      ACCA cgcggaaccg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          T G
                    T     T G T C C     A
      C G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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