The detailed information of tRNA gene sequence


Sequence ID>WENV170688970
Genome IDLFRM01270312
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 52980
End posion on genome 52905
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgctccatat
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCGAGC
CCTGTACCGCCCACCA
Downstream region at tRNA end position 
tccttttttt
Secondary structure (Cloverleaf model)
>WENV170688970	Val	TAC
                   t      ACCA tccttttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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