The detailed information of tRNA gene sequence


Sequence ID>WENV170689005
Genome IDLFRM01271536
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 494
End posion on genome 419
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ccaccattat
tRNA gene sequence 
GCCGACTTAGCTCAATTGGTAGAGCAACTGATTTGTAATCAGTAGGTTGGGGGTTCAAGT
CCTCTAGTCGGCACCA
Downstream region at tRNA end position 
ttattattta
Secondary structure (Cloverleaf model)
>WENV170689005	Thr	TGT
                   t      ACCA ttattattta
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T G
                    T     T C T C C     A
      T A A        A      + | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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