The detailed information of tRNA gene sequence


Sequence ID>WENV170689058
Genome IDLFRM01274767
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 371
End posion on genome 445
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggagccaaa
tRNA gene sequence 
GGGCCCATAGCTCAACGGCAGAGCCCCCGGCTCATAACCGGTTGGTTCCTGGTTCGAATC
CGGGTGGGCCCACCA
Downstream region at tRNA end position 
aaatagatag
Secondary structure (Cloverleaf model)
>WENV170689058	Met	CAT
                   a      ACCA aaatagatag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G G C C     A
        A A        A      | | + | |     G
      C     C T C G       C C T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        C     TGGTT
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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