The detailed information of tRNA gene sequence


Sequence ID>WENV170689062
Genome IDLFRM01275003
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1911
End posion on genome 1835
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaagtaatt
tRNA gene sequence 
GGCTCTTTAGCTCAGTCGGTTAGAGCGACGGAATCATAATCCGCAGGTCCCCCGTTCGAA
TCGGGGAAGAGCCACCA
Downstream region at tRNA end position 
aagaattcgt
Secondary structure (Cloverleaf model)
>WENV170689062	Met	CAT
                   t      ACCA aagaattcgt
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     T - A          T A
                    T     G G G G C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK