The detailed information of tRNA gene sequence


Sequence ID>WENV170689090
Genome IDLFRM01276541
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 265
End posion on genome 340
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gcgagcatat
tRNA gene sequence 
TCCTCGGTAGCTCAATTGGCAGAGCAATCGGCTGTTAACCGATAGGTTCTTAGTTCGAGT
CCAAGCCGGGGAGCCA
Downstream region at tRNA end position 
ttacttctcc
Secondary structure (Cloverleaf model)
>WENV170689090	Asn	GTT
                   t      GCCA ttacttctcc
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     G A A C C     A
      T A A        A      | | |   |     G
    T       C T C G       C T T A G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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