The detailed information of tRNA gene sequence


Sequence ID>WENV170689103
Genome IDLFRM01277058
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 305
End posion on genome 375
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
tggtaccaga
tRNA gene sequence 
GCGATAGTAGTCTAGCGGTAGGACAGGGGCTTCCCAAGCCTCTAGCCCGGGTTCGATTCC
CGGCTATCGCAtgg
Downstream region at tRNA end position 
gtgtatcttt
Secondary structure (Cloverleaf model)
>WENV170689103	Gly	CCC
                   a      Atgg gtgtatcttt
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C          T T
                    T     G G C C C     A
        G A        A      | | | | |     G
      C     T C T G       C C G G G     C
      G     + | | |                 T T
      G     G G A C
        T A        A     TAGC
                    G - C
                    G + T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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