The detailed information of tRNA gene sequence


Sequence ID>WENV170689105
Genome IDLFRM01277249
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 288
End posion on genome 376
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgtttctct
tRNA gene sequence 
GGAGAAATACCCAAGAGGCTGAAGGGGTCGGTCTCGAAAACCGATAGGAGTGAAAGCTCG
CGAGGGTTCAAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
ctattcaaat
Secondary structure (Cloverleaf model)
>WENV170689105	Ser	CGA
                   t      GCCA ctattcaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGAGTGAAAGCTCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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