The detailed information of tRNA gene sequence


Sequence ID>WENV170689119
Genome IDLFRM01278059
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 114
End posion on genome 39
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttcctttttt
tRNA gene sequence 
TCCTCCATAGCTCAGTCGGTAGAGCACGCGGCTGTTAACCGCGGTGTCGTTGGTTCGAGT
CCAACTGGGGGAGCCA
Downstream region at tRNA end position 
tctgaattta
Secondary structure (Cloverleaf model)
>WENV170689119	Asn	GTT
                   t      GCCA tctgaattta
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     A - T          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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