The detailed information of tRNA gene sequence


Sequence ID>WENV170689137
Genome IDLFRM01278805
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1881
End posion on genome 1971
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaacaaactt
tRNA gene sequence 
GGAGATGTACTCAAGTGGATGAAGAGGTGCCCCTGCTAAGGGTATAGGTCGGGAAACTGG
CGCGGGAGTTCGAATCTCCCCATCTCCGCCA
Downstream region at tRNA end position 
agtctttgat
Secondary structure (Cloverleaf model)
>WENV170689137	Ser	GCT
                   t      GCCA agtctttgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     G
    G       A C T C       G G G A G     C
    G         | | |                 T T
    A       A G A G
      T G A        G     TAGGTCGGGAAACTGGCGC
                    T - A
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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