The detailed information of tRNA gene sequence


Sequence ID>WENV170689143
Genome IDLFRM01279166
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 27252
End posion on genome 27167
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taacctctaT
tRNA gene sequence 
GCCGAGGTAGTCTAGTGGTAGGGCGCAAGCCTGGAGAGCTTGTGGGGCTTTGCCCCTCGG
GAGTTCGAATCTCCCCCTCGGCGTCt
Downstream region at tRNA end position 
tactattctt
Secondary structure (Cloverleaf model)
>WENV170689143	Ser	GGA
                   T      GTCt tactattctt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     G
      T     T C T G       G G G A G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TGGGGCTTTGCCCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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