The detailed information of tRNA gene sequence


Sequence ID>WENV170689145
Genome IDLFRM01279166
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 23965
End posion on genome 23878
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
taaccgttaT
tRNA gene sequence 
GCGAGGGTTGCCCAGCCAGGTCAAAGGCGCTAGGTTGAGGGCCTAGTCTCGTAGGAGTTC
GTGCGTTCGAATCGCACCCCTCGCATCt
Downstream region at tRNA end position 
gtttatactc
Secondary structure (Cloverleaf model)
>WENV170689145	Leu	GAG
                   T      ATCt gtttatactc
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C G C     A
    C C G A        T      | | | | |     G
  A         C C C G       G T G C G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCTCGTAGGAGTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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