The detailed information of tRNA gene sequence


Sequence ID>WENV170689173
Genome IDLFRM01281443
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 622
End posion on genome 546
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
attcggtcaa
tRNA gene sequence 
CGGGATGTAGCGCAGCTTGGGAGCGCACTTGAATGGGGTTCAAGGGGCCGGAGGTTCAAA
TCCTCTCATCCCGACCA
Downstream region at tRNA end position 
taaagcccac
Secondary structure (Cloverleaf model)
>WENV170689173	Pro	GGG
                   a      ACCA taaagcccac
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G G A        A     GGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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