The detailed information of tRNA gene sequence


Sequence ID>WENV170689200
Genome IDLFRM01282926
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 31
End posion on genome 107
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaggtaattt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGATAGTTCGAG
TCTATTCAGGCCCACCA
Downstream region at tRNA end position 
ttctactttt
Secondary structure (Cloverleaf model)
>WENV170689200	Ile	GAT
                   t      ACCA ttctactttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T T A T C     A
      T G A        A      + | | | |     G
    T       C T C G       G A T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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