The detailed information of tRNA gene sequence


Sequence ID>WENV170689241
Genome IDLFRM01285122
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 323
End posion on genome 249
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
atacatctgt
tRNA gene sequence 
GGCCCCTTGGTCAAGTGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
tacataaggg
Secondary structure (Cloverleaf model)
>WENV170689241	Glu	TTC
                   t      ACCA tacataaggg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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