The detailed information of tRNA gene sequence


Sequence ID>WENV170689262
Genome IDLFRM01286038
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 704
End posion on genome 629
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tatacccgaa
tRNA gene sequence 
GCGCTCGTAGCTCAATGGATAGAGTACTGCCCTCCGAAGGCAGGGGTTGCTGGTTCGATC
CCAGCCGAGCGCGCCA
Downstream region at tRNA end position 
tcacgttgtt
Secondary structure (Cloverleaf model)
>WENV170689262	Arg	CCG
                   a      GCCA tcacgttgtt
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          C T
                    T     C G A C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C T G G     C
    G       | | | +                 T T
    A       G A G T
      T A          A     GGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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