The detailed information of tRNA gene sequence


Sequence ID>WENV170689308
Genome IDLFRM01288383
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 90
End posion on genome 166
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cttaataatt
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAC
TCTGCCCAGACCCACCA
Downstream region at tRNA end position 
attttgcttt
Secondary structure (Cloverleaf model)
>WENV170689308	Ile	GAT
                   t      ACCA attttgcttt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T C
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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