The detailed information of tRNA gene sequence


Sequence ID>WENV170689321
Genome IDLFRM01288753
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 64882
End posion on genome 64958
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taagtgtcgc
tRNA gene sequence 
GCAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTGCGCCA
Downstream region at tRNA end position 
tattacgaaa
Secondary structure (Cloverleaf model)
>WENV170689321	Asp	GTC
                   c      GCCA tattacgaaa
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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