Sequence ID | >WENV170689342 |
Genome ID | LFRM01289901 |
Phylum/Class | [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle |
Species | |
Start position on genome
|
6863
|
End posion on genome
|
6935
|
Amino Acid
|
Ala
|
Anticodon
|
CGC
|
Upstream region at tRNA start position
|
atacgtacac
|
tRNA gene sequence
|
GGGGGCGTAGCTCAGCTGGGAGAGCGTACGGTTCGCATCCGTAAGGTCGAGAGTTCGATC CTCTTCGTCTCCAttt
|
Downstream region at tRNA end position
|
tacaaaaaaa
|
Secondary structure (Cloverleaf model) | >WENV170689342 Ala CGC
c Attt tacaaaaaaa
G - C
G - C
G + T
G - C
G + T
C - G
G - C C T
T T T C T C A
C G A A + | | | | G
T C T C G G A G A G C
G | | | | T T
G G A G C
G A G AGGTC
T - A
A - T
C - G
G - C
G - C
T T
T A
C G C
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |