The detailed information of tRNA gene sequence


Sequence ID>WENV170689357
Genome IDLFRM01290685
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 50
End posion on genome 126
Amino Acid Pro
Anticodon AGG
Upstream region at tRNA start position 
gccggaataT
tRNA gene sequence 
CGAGGTGTGGCTCAGCTTGGCTAGAGCGCTACGTTAGGGACGTAGAGGCCGCAGGTTCAA
ATCCTGTCACCTCGATtt
Downstream region at tRNA end position 
ttttataaaa
Secondary structure (Cloverleaf model)
>WENV170689357	Pro	AGG
                   T      ATtt ttttataaaa
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
    T C G A        G      + | | | |     A
  T         C T C G       G C A G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    A G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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