The detailed information of tRNA gene sequence


Sequence ID>WENV170689398
Genome IDLFRM01293004
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 133316
End posion on genome 133391
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggcagtgcgc
tRNA gene sequence 
GGGAGCATAGCTCAGCTGGGAGAGCACTTGCCTTACAAGCAAGGGGTCACAGGTTCGAGC
CCTGTTGCTCCCACCA
Downstream region at tRNA end position 
ggaagtggcc
Secondary structure (Cloverleaf model)
>WENV170689398	Val	TAC
                   c      ACCA ggaagtggcc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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