The detailed information of tRNA gene sequence


Sequence ID>WENV170689427
Genome IDLFRM01293875
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1487
End posion on genome 1403
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
caaagtttac
tRNA gene sequence 
GCGAGAGTGGCGAAATTGGCAAACGCACCAGACTTAGGATCTGGCGGTTAACACCTTGGG
GGTTCAAGTCCCCCCTCTCGCACCA
Downstream region at tRNA end position 
ttggcaggta
Secondary structure (Cloverleaf model)
>WENV170689427	Leu	TAG
                   c      ACCA ttggcaggta
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A A        A     CGGTTAACACCTT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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