The detailed information of tRNA gene sequence


Sequence ID>WENV170689436
Genome IDLFRM01294757
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 339
End posion on genome 265
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aagctcattt
tRNA gene sequence 
GGCCCTATAGCTCAAGGGATAGAACGGAAGTTTCCTAAACTTCAGATTCAGGTTCGAGTC
CTGGTGGGGCTACCT
Downstream region at tRNA end position 
tagcgggaat
Secondary structure (Cloverleaf model)
>WENV170689436	Arg	CCT
                   t      ACCT tagcgggaat
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      G A A        A      + | | | |     G
    G       C T C G       T C A G G     C
    G       | |   |                 T T
    A       G A A C
      T A          G     AGAT
                    G - C
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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