The detailed information of tRNA gene sequence


Sequence ID>WENV170689459
Genome IDLFRM01295493
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1896
End posion on genome 1823
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
tgcatcaaat
tRNA gene sequence 
GCGGGTGTAGTTCAGTGGTAGAACTTCAGCTTCCCAAGCTGACCGTGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
ggtaaacctg
Secondary structure (Cloverleaf model)
>WENV170689459	Gly	CCC
                   t      TCCA ggtaaacctg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        G A        A      + | | | |     G
      T     C T T G       G A G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        T     CCGT
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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