The detailed information of tRNA gene sequence


Sequence ID>WENV170689475
Genome IDLFRM01296453
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 25
End posion on genome 99
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aggaagcaac
tRNA gene sequence 
GGCCGCGTAGCTCAGTTGGTTAGAGCGCCGCCCTGTCACGGCGGAGGTCGCCGGTTCAAG
TCCGGTCGTGGTCGCtt
Downstream region at tRNA end position 
tggtcacgga
Secondary structure (Cloverleaf model)
>WENV170689475	Asp	GTC
                   c      GCtt tggtcacgga
                     G - C
                     G + T
                     C - G
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     T G G C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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