The detailed information of tRNA gene sequence


Sequence ID>WENV170689523
Genome IDLFRM01298815
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 179
End posion on genome 103
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gagagaccgt
tRNA gene sequence 
GGGACTATAGCTCAGCCGGCTAGAGCGCACGCCTGATAAGCGTGAGGCCGGTGGTTCGAG
TCCACCTAGTCCCACCA
Downstream region at tRNA end position 
aattagtggt
Secondary structure (Cloverleaf model)
>WENV170689523	Ile	GAT
                   t      ACCA aattagtggt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     A - T          T G
                    T     C C A C C     A
      C G A        A      | | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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