The detailed information of tRNA gene sequence


Sequence ID>WENV170689537
Genome IDLFRM01299509
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7748
End posion on genome 7675
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtataaggga
tRNA gene sequence 
GGGGCCATAGGGTAGCCTGGCCATCCTAGGAGACTGGGGGTCTTCTGACCTGCGTTCAAA
TCGCAGTGGCCCCAtta
Downstream region at tRNA end position 
caccattttt
Secondary structure (Cloverleaf model)
>WENV170689537	Pro	TGG
                   a      Atta caccattttt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G A C G C     A
      C G A        A      | | | | |     A
    C       T G G G       C T G C G     C
    T       | + | |                 T T
    G       A T C C
      G C C        T     CTGAC
                    A - T
                    G + T
                    G - C
                    A - T
                    G   G
                  A       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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