The detailed information of tRNA gene sequence


Sequence ID>WENV170689579
Genome IDLFRM01301304
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1906
End posion on genome 1981
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aattacctat
tRNA gene sequence 
GGCCCGTTGGAGAAACGGTTAACTCACATGCCTTTCACGCATGCATTCACGGGTTCGAAT
CCCGTACGGGTCACCA
Downstream region at tRNA end position 
tctattaaat
Secondary structure (Cloverleaf model)
>WENV170689579	Glu	TTC
                   t      ACCA tctattaaat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C A A        G      | | | | |     G
    G       A G A G       A C G G G     C
    G         | | |                 T T
    T       A C T C
      T A          A     CATTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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